diff --git a/swh/clearlydefined/mapping_utils.py b/swh/clearlydefined/mapping_utils.py --- a/swh/clearlydefined/mapping_utils.py +++ b/swh/clearlydefined/mapping_utils.py @@ -3,10 +3,17 @@ # License: GNU Affero General Public License version 3, or any later version # See top-level LICENSE file for more information +import json +from typing import Any +from typing import Dict from typing import Optional +from typing import Tuple +import gzip from swh.model.hashutil import hash_to_bytes from swh.model.hashutil import hash_to_hex +from swh.model.model import MetadataTargetType +from swh.model.model import Origin import psycopg2 @@ -27,3 +34,159 @@ sha1_git = hash_to_hex(sha1_git_tuple_data[0][0]) swh_id = "swh:1:cnt:{sha1_git}".format(sha1_git=sha1_git) return swh_id + + +def sha1_git_in_revisions(sha1_git: str, dsn: str) -> bool: + """ + Take sha1_git and dsn as input and + tell whether that sha1_git exists in revision + table + """ + read_connection = psycopg2.connect(dsn=dsn) + cur = read_connection.cursor() + sha1_git = hash_to_bytes(sha1_git) + cur.execute("SELECT id FROM revision WHERE id= %s;", (sha1_git,)) + rows = cur.fetchall() + if len(rows) == 1: + return True + else: + return False + + +def map_scancode(metadata_string: str, dsn: str) -> Tuple[bool, list]: + metadata = json.loads(metadata_string) + content = metadata.get("content") or {} + files = content.get("files") or {} + flag = True + data = [] + for file in files: + sha1 = file.get("sha1") + if sha1: + swh_id = map_sha1_with_swhid(sha1, dsn) + if swh_id: + data.append((swh_id, MetadataTargetType.CONTENT, None)) + else: + flag = False + return flag, data + + +def map_licensee(metadata_string: str, dsn: str) -> Tuple[bool, list]: + metadata = json.loads(metadata_string) + licensee = metadata.get("licensee") or {} + output = licensee.get("output") or {} + content = output.get("content") or {} + files = content.get("matched_files") or [] + flag = True + data = [] + for file in files: + sha1 = file.get("content_hash") + if sha1: + swh_id = map_sha1_with_swhid(sha1, dsn) + if swh_id: + data.append((swh_id, MetadataTargetType.CONTENT, None)) + else: + flag = False + return flag, data + + +def map_clearlydefined(metadata_string: str, dsn: str) -> Tuple[bool, list]: + metadata = json.loads(metadata_string) + files = metadata.get("files") or [] + flag = True + data = [] + for file in files: + hashes = file.get("hashes") or {} + sha1 = hashes.get("sha1") + if sha1: + swh_id = map_sha1_with_swhid(sha1, dsn) + if swh_id: + data.append((swh_id, MetadataTargetType.CONTENT, None)) + else: + flag = False + return flag, data + + +def map_harvest(tool: str, metadata_string: str, dsn: str) -> Tuple[bool, list]: + tools = { + "scancode": map_scancode, + "licensee": map_licensee, + "clearlydefined": map_clearlydefined, + } + + if tool in tools: + return tools[tool](metadata_string, dsn) + + return False, [] + + +def map_definition(metadata_string: str, dsn: str) -> Tuple[bool, list]: + metadata: Dict[str, Dict[str, Optional[Dict]]] = json.loads(metadata_string) + described: Dict[str, Optional[Dict[str, Any]]] = metadata.get("described") or {} + hashes: Dict[str, str] = described.get("hashes") or {} + sha1_git = hashes.get("gitSha") + source: Dict[str, str] = described.get("sourceLocation") or {} + url = source.get("url") + origin = None + if isinstance(url, str): + origin = Origin(url=url) + + if sha1_git and isinstance(sha1_git, str): + if not sha1_git_in_revisions(sha1_git=sha1_git, dsn=dsn): + return False, [] + swh_id: Optional[str] = "swh:1:rev:{sha1_git}".format(sha1_git=sha1_git) + metadata_type = MetadataTargetType.REVISION + return True, [(swh_id, metadata_type, origin)] + + sha1 = hashes.get("sha1") + if isinstance(sha1, str): + swh_id = map_sha1_with_swhid(sha1=sha1, dsn=dsn) + if not swh_id: + return False, [] + metadata_type = MetadataTargetType.CONTENT + return True, [(swh_id, metadata_type, origin)] + + return False, [] + + +def check_for_valid_ID(list_cd_path: list) -> bool: + if len(list_cd_path) < 6: + return False + if list_cd_path[4] != "revision": + return False + if not list_cd_path[-1].endswith(".json"): + return False + return True + + +def map_row(row: tuple, swh_dsn: str) -> Optional[Tuple[bool, list]]: + cd_path = row[0] + list_cd_path = cd_path.split("/") + metadata_string = gzip.decompress(row[1]).decode() + + if not check_for_valid_ID(list_cd_path): + return None + + # if the row doesn't contain any information in metadata return None + if metadata_string == "": + return None + + # if the ID of row contains 9 components: + # ////revision//tool//.json + # then it is a harvest + if len(list_cd_path) == 9: + if list_cd_path[6] != "tool": + return None + tool = list_cd_path[7] + if tool not in ("scancode", "licensee", "clearlydefined"): + return None + return map_harvest(tool=tool, metadata_string=metadata_string, dsn=swh_dsn) + + # if the ID of row contains 6 components: + # ////revision/.json + # then it is a defintion + if len(list_cd_path) == 6: + return map_definition( + metadata_string=metadata_string, + dsn=swh_dsn, + ) + return None diff --git a/swh/clearlydefined/tests/data/clearlydefined.json b/swh/clearlydefined/tests/data/clearlydefined.json new file mode 100644 --- /dev/null +++ b/swh/clearlydefined/tests/data/clearlydefined.json @@ -0,0 +1,282 @@ +{ + "_metadata": { + "type": "npm", + "url": "cd:/npm/npmjs/@pixi/mesh-extras/5.3.5", + "fetchedAt": "2020-12-18T10:26:42.827Z", + "links": { + "self": { + "href": "urn:npm:npmjs:@pixi:mesh-extras:revision:5.3.5:tool:clearlydefined:1.3.4", + "type": "resource" + }, + "siblings": { + "href": "urn:npm:npmjs:@pixi:mesh-extras:revision:5.3.5:tool:clearlydefined", + "type": "collection" + }, + "licensee": { + "href": "urn:npm:npmjs:@pixi:mesh-extras:revision:5.3.5:tool:licensee", + "type": "collection" + }, + "scancode": { + "href": "urn:npm:npmjs:@pixi:mesh-extras:revision:5.3.5:tool:scancode", + "type": "collection" + }, + 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"5.3.5", + "next": "5.0.0-alpha.3", + "latest-5.1.x": "5.1.6", + "prerelease": "5.4.0-rc.3", + "latest-5.2.x": "5.2.5" + }, + "maintainers": [ + { + "name": "bigtimebuddy", + "email": "matt@mattkarl.com" + } + ], + "description": "Custom Mesh display objects, like Rope and SimplePlane", + "homepage": "http://pixijs.com/", + "repository": { + "type": "git", + "url": "git+https://github.com/pixijs/pixi.js.git" + }, + "contributors": [ + { + "name": "Matt Karl", + "email": "matt@mattkarl.com" + } + ], + "author": { + "name": "Mat Groves" + }, + "bugs": { + "url": "https://github.com/pixijs/pixi.js/issues" + }, + "license": "MIT", + "readme": "# @pixi/mesh-extras\n\n## Installation\n\n```bash\nnpm install @pixi/mesh-extras\n```\n\n## Usage\n\n```js\nimport { MeshRenderer } from '@pixi/mesh';\nimport { Renderer } from '@pixi/core';\nimport { Rope } from '@pixi/mesh-extras';\n\nRenderer.registerPlugin('mesh', MeshRenderer);\n\nconst rope = new Rope();\n```", + "readmeFilename": "README.md", 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Licensed works, modifications, and larger works may be distributed under different terms and without source code.", + "how": "Create a text file (typically named LICENSE or LICENSE.txt) in the root of your source code and copy the text of the license into the file. 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"packages": [], + "emails": [], + "urls": [ + { + "url": "https://angular.io/license", + "start_line": 9, + "end_line": 9 + } + ], + "is_legal": false, + "is_manifest": false, + "is_readme": false, + "is_top_level": false, + "is_key_file": false, + "is_generated": false, + "is_license_text": false, + "files_count": 0, + "dirs_count": 0, + "size_count": 0, + "scan_errors": [] + } + ] + } +} \ No newline at end of file diff --git a/swh/clearlydefined/tests/test_mapping.py b/swh/clearlydefined/tests/test_mapping.py --- a/swh/clearlydefined/tests/test_mapping.py +++ b/swh/clearlydefined/tests/test_mapping.py @@ -4,7 +4,17 @@ # See top-level LICENSE file for more information from swh.clearlydefined.mapping_utils import map_sha1_with_swhid +from swh.clearlydefined.mapping_utils import map_row import psycopg2 +import gzip +from swh.model.model import MetadataTargetType +from swh.model.model import Origin + + +def file_data(file_name): + with open(file_name) as file: + data = file.read() + return data.encode() def add_data(dsn: str): @@ -49,7 +59,7 @@ write_connection.commit() -def test_mapping(swh_storage_backend_config): +def test_mapping_sha1_with_swhID(swh_storage_backend_config): dsn = swh_storage_backend_config["db"] add_data(dsn=dsn) sha1 = "a6628c8a4fbc08c29b8472e2222975e5b9918131" @@ -70,3 +80,91 @@ add_data(dsn=dsn) sha1 = "6ac599151a7aaa8ca5d38dc5bb61b49193a3cadc1ed33de5a57e4d1ecc53c846" assert map_sha1_with_swhid(sha1=sha1, dsn=dsn) is None + + +def test_map_row_for_definitions_with_sha1(swh_storage_backend_config): + dsn = swh_storage_backend_config["db"] + row = [] + add_data(dsn) + row.append("maven/mavencentral/za.co.absa.cobrix/cobol-parser/revision/0.4.0.json") + row.append( + gzip.compress(file_data("swh/clearlydefined/tests/data/definitions.json")) + ) + row = tuple(row) + assert ( + True, + [ + ( + "swh:1:cnt:e103b11cbfecbc116dacbb1f9ab2a02176092a32", + MetadataTargetType.CONTENT, + Origin( + url="http://central.maven.org/maven2/za/co/absa/cobrix/" + "cobol-parser/0.4.0/cobol-parser-0.4.0-sources.jar" + ), + ) + ], + ) == map_row(row, dsn) + + +def test_map_row_for_scancode(swh_storage_backend_config): + dsn = swh_storage_backend_config["db"] + row = [] + add_data(dsn) + row.append("npm/npmjs/@ngtools/webpack/revision/10.2.1/tool/scancode/3.2.2.json") + row.append(gzip.compress(file_data("swh/clearlydefined/tests/data/scancode.json"))) + row = tuple(row) + assert ( + False, + [ + ( + "swh:1:cnt:e103b11cbfecbc116dacbb1f9ab2a02176092a32", + MetadataTargetType.CONTENT, + None, + ) + ], + ) == map_row(row, dsn) + + +def test_map_row_for_licensee(swh_storage_backend_config): + dsn = swh_storage_backend_config["db"] + row = [] + add_data(dsn) + row.append( + "npm/npmjs/@fluidframework/replay-driver/revision/0.31.0/tool/licensee/\ + 9.13.0.json" + ) + row.append(gzip.compress(file_data("swh/clearlydefined/tests/data/licensee.json"))) + row = tuple(row) + assert ( + True, + [ + ( + "swh:1:cnt:095b80e14c3ea6254f57e94761f2313e32b1d58a", + MetadataTargetType.CONTENT, + None, + ) + ], + ) == map_row(row, dsn) + + +def test_map_row_for_clearlydefined(swh_storage_backend_config): + dsn = swh_storage_backend_config["db"] + row = [] + add_data(dsn) + row.append( + "npm/npmjs/@pixi/mesh-extras/revision/5.3.5/tool/clearlydefined/1.3.4.json" + ) + row.append( + gzip.compress(file_data("swh/clearlydefined/tests/data/clearlydefined.json")) + ) + row = tuple(row) + assert ( + False, + [ + ( + "swh:1:cnt:095b80e14c3ea6254f57e94761f2313e32b1d58a", + MetadataTargetType.CONTENT, + None, + ) + ], + ) == map_row(row, dsn)