diff --git a/swh/indexer/storage/api/wsgi.py b/swh/indexer/storage/api/wsgi.py
deleted file mode 100644
--- a/swh/indexer/storage/api/wsgi.py
+++ /dev/null
@@ -1,8 +0,0 @@
-# Copyright (C) 2019  The Software Heritage developers
-# See the AUTHORS file at the top-level directory of this distribution
-# License: GNU General Public License version 3, or any later version
-# See top-level LICENSE file for more information
-
-from .server import make_app_from_configfile
-
-application = make_app_from_configfile()
diff --git a/tox.ini b/tox.ini
--- a/tox.ini
+++ b/tox.ini
@@ -7,7 +7,10 @@
   pytest-cov
   pifpaf
 commands =
-  pifpaf run postgresql -- pytest --doctest-modules --hypothesis-profile=fast --cov=swh --cov-branch {posargs}
+  pifpaf run postgresql -- pytest --doctest-modules --hypothesis-profile=fast \
+         {envsitepackagesdir}/swh/indexer \
+         --cov={envsitepackagesdir}/swh/indexer \
+         --cov-branch {posargs}
 
 [testenv:py3-slow]
 deps =
@@ -15,7 +18,10 @@
   pytest-cov
   pifpaf
 commands =
-  pifpaf run postgresql -- pytest --doctest-modules --hypothesis-profile=slow --cov=swh --cov-branch {posargs}
+  pifpaf run postgresql -- pytest --doctest-modules --hypothesis-profile=slow \
+         {envsitepackagesdir}/swh/indexer \
+         --cov={envsitepackagesdir}/swh/indexer \
+         --cov-branch {posargs}
 
 [testenv:py3-prop]
 deps =
@@ -23,7 +29,9 @@
   pytest-cov
   pifpaf
 commands =
-  pifpaf run postgresql -- pytest --doctest-modules --hypothesis-profile=fast -m property_based --disable-warnings
+  pifpaf run postgresql -- pytest --doctest-modules --hypothesis-profile=fast \
+         -m property_based --disable-warnings \
+         {envsitepackagesdir}/swh/indexer
 
 [testenv:flake8]
 skip_install = true